TraceLogo Tracing the origin of food

TRACE - Molecular Biology Database


EuropeLogo

Database


Documentation
Full Documentation

Search



Login
Login name:
Password:
You are here: Core Forms > Search PCR > PCR

PCR

First element FirstElement before Previous
Entry No. of 51 
Next Next elementLast Last element

PCR

Name:

Eri_adh1

Type: Real-Time PCR System: Quantitative
Genetic Element: alcohol dehydrogenase 1 Ampl. Length: 81 Ampl. Position: Sequence Size [bp]:
AnnTemp [°C]: 60 Taxonomy: Erica Temp. Time Program: Process Time [min:s] Temperature [°C]<br>Pre-PCR: decontamination 02:00 50<br>Pre-PCR: activation of DNA polymerase and denaturation of template DNA 10:00 95<br>PCR (45 cycles) <br>Step 1 Denaturation 00:15 95<br>Step 2 Annealing and elongation 01:00 60
Device: Reagents: Total volume 10 µl<br>Template DNA (maximal amount 200 ng) 2 µl<br>DNA polymerase AmpliTaq Gold&reg; 1,5 IU<br>Decontamination system dUTP<br>AmpErase uracil N-glycosylase 400 µmol/l<br>0,5 IU<br>Reaction buffer TaqMan&reg; buffer A (containing passive reference ROX)a 1 X<br> MgCl2 8 mmol/l<br>Primers 300 nmol/l 300 nmol/l<br>dNTP dATP, dCTP, dGTP 200 µmol/l each<br>Probe 200 nmol/l 200 nmol/l<br> nPrimers: 3 Organisation: BfR
PCR Description: Sequence:
LOD [copy]: 10 LOQ [copy]: 100 Efficiency [%]: 108
Remarks:

Food/Product

Food Name: Generic Image: Product Type: Food Source: Product Website:
Miel de CorseSUGAR AND HONEY [A0462]INSECT [B1220]http://europa.e... /en/1129_en.htm

Primers

PPName: Type: PrimerSequence: Length [bp]: T_Ann [°C]: TmThermo [°C]: Tm2AT [°C]: GC [%]: Position:
Eri_adh1-f Sense ggA TAg ggg AgT gAT gAT CCA T 22 64.7 (PCR: 60) 56.0 66 50.00
Eri_adh1-r Antisense gAT gTT CCg ACg AAA Tgg TAT ATg 24 65.3 (PCR: 60) 56.6 68 41.67
Eri_adh1-probe Marker/Probe 5Ž -FA M)- Tg CCg TTT TTA gAA AAC CTT gAT TTC CCA -( TAM RA) -3 29 72.1 (PCR: 60) 67.1 80 37.93

Publications (more...)

Short Title Type Date Download
SOP PlantSpecies by PCR SOP September 2007 SOP_BfR_species-detection_071016.pdf
Analytical Methods: Detection of plant species in honey Journal Accepted: 22.09.2008 FoodChemistry_118_979-986_Laube_Honey_2010.pdf

You are here: Core Forms > Search PCR > PCR