TraceLogo Tracing the origin of food

TRACE - Molecular Biology Database


EuropeLogo

Database


Documentation
Full Documentation

Search



Login
Login name:
Password:
You are here: Core Forms > Search PCR > PCR

PCR

First element FirstElement before Previous
Entry No. of 51 
Next Next elementLast Last element

PCR

Name:

ApisCerana_RT

Type: Real-Time PCR System: Qualitative
Genetic Element: 18S rRNA Ampl. Length: 113 Ampl. Position: 358-470 Sequence Size [bp]: 470.Apis cerana mitochondr.16S rRNA large subunit
AnnTemp [°C]: 57-62 Taxonomy: Oriental Honeybee Temp. Time Program: UNG activity: <br>2 min. / 50 °C<br>Activation of HotStarTaq: <br>10 min. / 95 °C<br>Amplification (50 cycles): <br>15 sec. / 95 °C <br>60 sec. / 60 °C
Device: ABI Prism&reg; Sequence Detection System 7700, Applied Biosystems Reagents: 2x RT PCR Master Mix; Forward Primer 320 nM;<br>Reverse Primer 320 nM; Probe 160 nM; H2O <br> nPrimers: 3 Organisation: Biolytix
PCR Description: Real-Time PCR for the detection of Apis cerana Sequence: Apis.Mellifera_18S_rRNA
LOD [copy]: LOQ [copy]: Efficiency [%]:
Remarks: With the method describe it is possible to detect DNA from Apis cerana, Apis mellifera, Apis florae and Apis dorsata with real-time PCR . The real-time PCR systems are based on detection of mitochondrial rRNA. This method was designed by Mandy Schöne-Michling.

Food/Product

Food Name: Generic Image: Product Type: Food Source: Product Website:
Miel de CorseSUGAR AND HONEY [A0462]INSECT [B1220]http://europa.e... /en/1129_en.htm

Primers

PPName: Type: PrimerSequence: Length [bp]: T_Ann [°C]: TmThermo [°C]: Tm2AT [°C]: GC [%]: Position:
A.cera-F Sense CCT TAg gAT AAC AgC gTA ATA T 22 57.8 49.1 60.0 36.4 358-379
A.cera-R Antisense CAg ACT TAA AAT TTT AAA CTC CT 23 57.4 48.6 58.0 26.1 448-470
A.cera-probe Marker/Probe TTg ATA gAC CAC ATT gAT AAA gAT gT 26 61.9 53.1 68.0 30.8 383-408

Sequence (more...)

NCBI-Acc:

L06178 REGION: complement(1329

Sequence Description: Apis mellifera ligustica complete mitochondrial genome
BaseCount:
DNA-Sequence: Apis.Mellifera.Ligustica_Mitochondrial-rRNA_S18_L06178.txt AminoAcid-Sequence:

Publications (more...)

Short Title Type Date Download
SOP real-time PCR for Apis species SOP November 2005 Detection-ApisSpecies-Conf.pdf
Analytical Methods: Detection of plant species in honey Journal Accepted: 22.09.2008 FoodChemistry_118_979-986_Laube_Honey_2010.pdf

You are here: Core Forms > Search PCR > PCR